Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0056.Seq
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 4/20 (20%)
 Frame = +2

Query: 293 RTKWKIFNFYL----YDINE 340
           RT WK FN +L    Y+ NE
Sbjct: 409 RTVWKFFNIFLITPFYNFNE 428


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 457 CMSNAYQYNYYH*QTLPFLNEFYYNIFYYLAKR 555
           C     +  Y   QTL    EF++N  +YL +R
Sbjct: 4   CPRRRGRQTYTRFQTLELEKEFHFN--HYLTRR 34


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 496 VNDNNCTDKHYSYI 455
           +N N CT  HY+++
Sbjct: 48  INANLCTHVHYAFL 61


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 457 CMSNAYQYNYYH*QTLPFLNEFYYNIFYYLAKR 555
           C     +  Y   QTL    EF++N  +YL +R
Sbjct: 155 CPRRRGRQTYTRFQTLELEKEFHFN--HYLTRR 185


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 457 CMSNAYQYNYYH*QTLPFLNEFYYNIFYYLAKR 555
           C     +  Y   QTL    EF++N  +YL +R
Sbjct: 214 CPRRRGRQTYTRFQTLELEKEFHFN--HYLTRR 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,931
Number of Sequences: 336
Number of extensions: 2843
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)