Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0031.Seq
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    89   3e-20
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    89   3e-20
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    83   2e-18
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    29   0.052
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.4  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 89.0 bits (211), Expect = 3e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +2

Query: 569 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 709
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEV
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEV 47


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 89.0 bits (211), Expect = 3e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = +2

Query: 569 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 709
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEV
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEV 47


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 83.4 bits (197), Expect = 2e-18
 Identities = 38/47 (80%), Positives = 45/47 (95%)
 Frame = +2

Query: 569 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEV 709
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEV 46


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 0.052
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 162 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNFDAKRLI--GRKFEDATVQADMKHWPFEV 335
           DH  +  +H +  SH   +QEP G     H F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 336 VS 341
           +S
Sbjct: 399 LS 400


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 342 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 467
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 114 LPAREGGDHRQRPGQQDH 167
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 524 TKDAGTISGLNVLRIINEPTAA 589
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 304 CTVASSNLRPMRRLASKLCCWGSSPP 227
           CT  + N R  R    K+ C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,994
Number of Sequences: 336
Number of extensions: 4193
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)