Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D08f
         (386 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   1.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   9.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 230 KVLVPFLKEKGFSVEAIWGITLQE 301
           K  + +LKE+GF    IW + + +
Sbjct: 840 KTKMAWLKEEGFGGIMIWSVDMDD 863


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 184 DNVTGYWGFWN 216
           D V  YWG W+
Sbjct: 24  DKVVCYWGTWS 34


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 243 GTRTLAIAPVPKTPIP 196
           G R     PVP TP P
Sbjct: 199 GLRNYGPEPVPSTPYP 214


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 300 SCKVIPHIASTENPFS 253
           S  ++PH A   NP +
Sbjct: 92  STPIVPHFAYNHNPLT 107


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 245  FLKEKGFSVEAIWGITLQE 301
            ++K KGF     W I L +
Sbjct: 953  YIKTKGFGGAVAWTIDLDD 971


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,205
Number of Sequences: 336
Number of extensions: 1644
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)