Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0114
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   5.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 61  PALVEAPIVPSPVHVTPRSWTTYPSRPHSY*HQRCCQRY 177
           P   EA   P+P H +  S++   S  ++  HQ   + Y
Sbjct: 194 PTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENFENY 232


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 83  SSHPQSTSPLVPGQLTPLV 139
           S  P+S+    PG+ TPL+
Sbjct: 237 SLRPRSSQKSAPGKRTPLI 255


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 43   ESPDVGPALVEAPIVPSPVHVTPRS 117
            E  +  P++  + +VP P H T +S
Sbjct: 1791 EREEAPPSVHSSTVVPPPQHSTTQS 1815


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,859
Number of Sequences: 336
Number of extensions: 2112
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)