Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0111
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.53 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.70 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   3.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.6  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   8.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 586 CAGLVRAGGRDYDNTDLGALPSSKM 660
           CA ++  GGR+  N +   LP  K+
Sbjct: 7   CALILTVGGRNLKNAEFNGLPEEKL 31


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 430 LGYYDTLLDNSTLLDVW 380
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 171 TNYHYLSTATTFHGEFYDPAYRRIIAGSP 257
           T  HY      + GE Y+P +  +    P
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTVNEAQP 329



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 509 NSL*PTKKTAGNSTRVMIAS*LITNSAPVWSGLVAATTTILTWVPCLLPKCASRHRIFWK 688
           +SL P     G +  VM     +  S+P  +  +A+ T  +  V   +P  ASR  + + 
Sbjct: 228 SSLPPGNNIHGMAPSVMYPH--LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFP 285

Query: 689 EQCQ 700
            Q Q
Sbjct: 286 NQYQ 289


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 171 TNYHYLSTATTFHGEFYDPAYRRIIAGSP 257
           T  HY      + GE Y+P +  +    P
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTVNEAQP 277



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 509 NSL*PTKKTAGNSTRVMIAS*LITNSAPVWSGLVAATTTILTWVPCLLPKCASRHRIFWK 688
           +SL P     G +  VM     +  S+P  +  +A+ T  +  V   +P  ASR  + + 
Sbjct: 176 SSLPPGNNIHGMAPSVMYPH--LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFP 233

Query: 689 EQCQ 700
            Q Q
Sbjct: 234 NQYQ 237


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 171 TNYHYLSTATTFHGEFYDPAYRRIIAGSP 257
           T  HY      + GE Y+P +  +    P
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTVNEAQP 460



 Score = 22.2 bits (45), Expect = 4.9
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +2

Query: 509 NSL*PTKKTAGNSTRVMIAS*LITNSAPVWSGLVAATTTILTWVPCLLPKCASRHRIFWK 688
           +SL P     G +  VM     +  S+P  +  +A+ T  +  V   +P  ASR  + + 
Sbjct: 359 SSLPPGNNIHGMAPSVMYPH--LNRSSPTTATAIASATVTIQNVSNTIPPFASRGSMHFP 416

Query: 689 EQCQ 700
            Q Q
Sbjct: 417 NQYQ 420


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 93  CSPIDTGLPRSLAVQLQTAASTATAKVRT 7
           C P    L R L   LQT  +  T K RT
Sbjct: 53  CPPQGVDLKRVLPEALQTNCAKCTEKQRT 81


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 95  PSLVQIEVFLPILNQW 142
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 619 SRGHQPGPNRRRICYQSRRDHDPCTV 542
           S+  + G N   + Y S   HD CTV
Sbjct: 129 SQADRDGKNYPAVPYGSGDFHDSCTV 154


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 619 SRGHQPGPNRRRICYQSRRDHDPCTV 542
           S+  + G N   + Y S   HD CTV
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTV 155


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 619 SRGHQPGPNRRRICYQSRRDHDPCTV 542
           S+  + G N   + Y S   HD CTV
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTV 155


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +3

Query: 159 DIVLTNYHYLSTATTFHGEFYDPAYRRIIAGSPVAVSPVKYL 284
           DIV  + H L   +  H   YD  +   +   P    P ++L
Sbjct: 71  DIVTYSGHKLKAGSMVHLHIYDMHHNPQVYPDPEKFDPDRFL 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,541
Number of Sequences: 336
Number of extensions: 4907
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)