Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0093
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 241 YLYTINVKTN*FLC 200
           + YT+N  TN FLC
Sbjct: 266 FWYTVNASTNIFLC 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 241 YLYTINVKTN*FLC 200
           + YT+N  TN FLC
Sbjct: 266 FWYTVNASTNIFLC 279


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 505 NINSYYWFMFKTYVPNYQIRLLDTYSYYS 419
           N+NS  ++  +   PN +  +L+ + +Y+
Sbjct: 222 NVNSTVYYDPRALSPNLEFVVLEAFDFYT 250


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 483 LCLRHMYQIIKFDCWTHIHITVELIFVYFYIYF 385
           +C+ + Y +    C   I  T+ L+F+    YF
Sbjct: 256 VCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -3

Query: 517 SNIRNINSYYWFMFKTYVPNYQIRLLDTYSYYS 419
           S + N+NS  ++  +   PN     L+ + +Y+
Sbjct: 210 SVLPNVNSSVYYDPRALAPNLDFITLEAFDFYT 242


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -3

Query: 625 VVIIFT-WTFFRPDS 584
           VV  FT WT +RPD+
Sbjct: 23  VVCYFTSWTIYRPDN 37


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 264 RVHFLVKCILL*NYTLLN 317
           ++H  VKC+ L  Y + +
Sbjct: 777 KIHLFVKCVFLMGYQIFD 794


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,538
Number of Sequences: 336
Number of extensions: 3355
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)