Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30111
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    27   0.12 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    27   0.15 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 239 LPFHVQKSVFQLFFTGQSFYYTRGFANSIMIFELLYVNFRKWFSCFN*FKLI 394
           LPF V   +F LF T ++F +TR     +  +E   V F ++++ F  + LI
Sbjct: 112 LPFVVTNIIFVLFHTYEAFVWTR--IMGVAYYEQYAVEFFQFYAQFIVYFLI 161


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 124 LIWRRQVMSLGTS-L*LKIWFWKVYKNTILFIPFAMLCLLAFSCTEISFPIIFYRPIILL 300
           L   +QV S+    + L+ W WKVY   +  + F    L+  +C  +    I+ +  +L+
Sbjct: 182 LFEEKQVQSMPQCWIDLQTWQWKVYITLVALVLFVFPALIISACYAVIVRTIWSKSKLLI 241


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 671 WTSTITSKTLVVELTGKHPYSARAWTPGGN 582
           WTS +T   ++ +   K  Y  + W P  +
Sbjct: 437 WTSHLTQADVIEKYLSKARYVIQTWVPASD 466


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 714 GLTGCRVLLRRPGSLDVNDHLED 646
           GL G  V++R+P + D N HL D
Sbjct: 254 GLYGS-VVIRQPPAKDPNSHLYD 275


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 714 GLTGCRVLLRRPGSLDVNDHLED 646
           GL G  V++R+P + D N HL D
Sbjct: 254 GLYGS-VVIRQPPAKDPNSHLYD 275


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 623 SRSTLQPRSSR*SLTSNDPGLRSKTRQPVRP 715
           SRS  QP++ R   T  +P  R +T +   P
Sbjct: 213 SRSKRQPKTGREDQTRRNPYYRPRTSRTEPP 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,716
Number of Sequences: 336
Number of extensions: 3477
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)