Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30043
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   1.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.9  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 642 ILSYLFFVLVISYT*LLNKKYISKY 716
           ++  LFFV+ I+ +   N KY +KY
Sbjct: 4   LVPLLFFVIAIASSLAENSKYTTKY 28


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 699 KYISKYLTIYSWS*LMFPNQLIIFCI 776
           K I+K LTI       FP + +++CI
Sbjct: 16  KCITKVLTILGLLSCSFPKKKLVYCI 41


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 699 KYISKYLTIYSWS*LMFPNQLIIFCI 776
           K I+K LTI       FP + +++CI
Sbjct: 12  KCITKVLTILGLLSCSFPKKKLVYCI 37


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 724  IVKYLDIYFLFNNYV*EITN-TKKRYERIWLAK 629
            IVK+LD    F+  + ++ N  KK+++R+ +A+
Sbjct: 1183 IVKFLDGIMAFDIQLKQVVNYKKKKFQRMVVAR 1215


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +2

Query: 593 YCIYRSLVI-TXXXXXXXXXXXXLCISYFLYVIVKQKIYIQIL 718
           Y  Y + +I T            LCI YF Y  +   +++ +L
Sbjct: 213 YYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLL 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,190
Number of Sequences: 336
Number of extensions: 2243
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)