Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30011
         (413 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    71   3e-15
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    70   1e-14
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    20   8.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 71.3 bits (167), Expect = 3e-15
 Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = +2

Query: 5   SFCGLKDKKYPDRRAMGFPFDR-PSXSATSLQDFILPNMGLQDITIQLQNVT-EPNPRN 175
           S+CG+KDK YPDRR+MG+PFDR P     +LQ F+ PNM +QD+TI+  + T  P  RN
Sbjct: 625 SYCGIKDKLYPDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 69.7 bits (163), Expect = 1e-14
 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
 Frame = +2

Query: 5   SFCGLKDKKYPDRRAMGFPFDR-PSXSATSLQDFILPNMGLQDITIQLQN-VTEPNPRN 175
           +FCG+KDK YPDRR+MG+PFDR P     +LQ F+ PNM +Q++ IQ  N + +P  R+
Sbjct: 624 TFCGIKDKLYPDRRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVIQFSNRIVKPRNRD 682


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 240 DFLFKVAFKKPKG*CIHLRIF 302
           DF+ K     P+G  +H+ IF
Sbjct: 71  DFVTKTGNTIPEGTVLHIHIF 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,885
Number of Sequences: 336
Number of extensions: 1807
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)