Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00130
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   1.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.6  

>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 542 TMPCMSTLCRRQLKRP 589
           T+PC  T+C +   RP
Sbjct: 5   TLPCKCTICPKAFSRP 20


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 266 REREQKHTALRDHGRPLCQQD 328
           R   Q    LR H R LCQ D
Sbjct: 159 RVSAQMKADLRSHFRALCQDD 179


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 49  HKQLRKQSYVMYAFI 5
           +KQL K+SY++ +F+
Sbjct: 139 YKQLLKRSYLIISFV 153


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 49  HKQLRKQSYVMYAFI 5
           +KQL K+SY++ +F+
Sbjct: 139 YKQLLKRSYLIISFV 153


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 531 SYRGQCLACRL 563
           ++R QC ACRL
Sbjct: 87  THRNQCRACRL 97


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 531 SYRGQCLACRL 563
           ++R QC ACRL
Sbjct: 87  THRNQCRACRL 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,926
Number of Sequences: 336
Number of extensions: 4039
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)