Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00127
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   5.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   5.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 419 FIVYMWNFTA*MAASGFSLCSAAVICVFMSRSHAVGR 309
           F++YM    A + A      SAA+  +   R HA+GR
Sbjct: 486 FMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGR 522


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 419 FIVYMWNFTA*MAASGFSLCSAAVICVFMSRSHAVGR 309
           F++YM    A + A      SAA+  +   R HA+GR
Sbjct: 378 FMLYMKEMRAKVVAECTLKESAAINQILGRRWHALGR 414


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 203 KQHKERDERATEI 241
           +QH ERDER   +
Sbjct: 68  QQHSERDERLAHV 80


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 241 DLRSSLISFLVLLL 200
           DL +SL  FLVLLL
Sbjct: 206 DLFNSLFGFLVLLL 219


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 311 RPSNIPVSEFLLTCRCC 261
           +PS I  + FL  C CC
Sbjct: 68  QPSVITPTGFLKECYCC 84


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -2

Query: 274  RVDVVSRCRHPDLRSSLIS 218
            +++ + + ++PDLRS  +S
Sbjct: 1115 KIESLEKMQYPDLRSPAVS 1133


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -2

Query: 274  RVDVVSRCRHPDLRSSLIS 218
            +++ + + ++PDLRS  +S
Sbjct: 1115 KIESLEKMQYPDLRSPAVS 1133


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 67   TQYRFVFFKFNKIG 26
            TQY  V   FNK+G
Sbjct: 1070 TQYSVVVQAFNKVG 1083


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,659
Number of Sequences: 336
Number of extensions: 2304
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)