Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00102X
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           20   9.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   9.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   9.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 378 QNKPEKQKLETSSPRAEF 431
           QN+PE  +  +S+PR E+
Sbjct: 418 QNQPESPESSSSTPRHEW 435


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 78  CRRKCDRIPRSPQRRVAT 25
           C+RK   +P  PQ++ A+
Sbjct: 69  CKRKIQFMPYGPQQQPAS 86


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 432 RIRHEENWSRV 400
           +IRH + WS+V
Sbjct: 691 KIRHRKRWSQV 701


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 432 RIRHEENWSRV 400
           +IRH + WS+V
Sbjct: 691 KIRHRKRWSQV 701


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 432 RIRHEENWSRV 400
           +IRH + WS+V
Sbjct: 691 KIRHRKRWSQV 701


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 432 RIRHEENWSRV 400
           +IRH + WS+V
Sbjct: 691 KIRHRKRWSQV 701


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/26 (26%), Positives = 11/26 (42%)
 Frame = -2

Query: 438 WCRIRHEENWSRVFVFQVYFVVTSVY 361
           W R+     WS  F+  V ++    Y
Sbjct: 266 WDRVMLLTFWSAFFIVNVLYICNQCY 291


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 322 LRCIHFCLIIASAINRCDYKINLKNKNSRPVLLVPNSAP 438
           LR +   L+I   I +  + I +KN     V+ +  SAP
Sbjct: 58  LRMVLIDLLIVGCILKHIFNILMKNVTLNDVVFIFCSAP 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,749
Number of Sequences: 336
Number of extensions: 2181
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)