Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00061
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 177 SGEDWTPDADSNEPASRTGRKR 242
           SG+   P +DS     RTG KR
Sbjct: 22  SGQQHGPQSDSRNQQLRTGEKR 43


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +1

Query: 598 KCTCVYSGWNVDNRDNYYPITEILDRNPRTDSKEICVALDLNDLIKVRDK 747
           K  C Y+ W      N   + E ++ +  T      V LD +  I+V D+
Sbjct: 24  KVICYYASWGAQRPGNGQFVPEDINPDLCTHINYAFVGLDKDCNIQVLDE 73


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 584 PFDSIGINFCNNALPSIFHKFSSSSLI 504
           P+ S  +    ++LPS F++FS + LI
Sbjct: 205 PYPS-ALPISTSSLPSDFYRFSPTGLI 230


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 584 PFDSIGINFCNNALPSIFHKFSSSSLI 504
           P+ S  +    ++LPS F++FS + LI
Sbjct: 97  PYPS-ALPISTSSLPSDFYRFSPTGLI 122


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 559 SVIMLCHQFSTSSVHQ 512
           +VI+ CH  S   VHQ
Sbjct: 170 NVILACHMLSFLMVHQ 185


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 150 PALTHPNLLRLTL 112
           PAL+ PNLL L+L
Sbjct: 461 PALSTPNLLSLSL 473


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,642
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)