Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00052
         (404 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    26   0.16 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    26   0.16 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    25   0.37 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.5  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   3.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   4.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   8.0  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = +2

Query: 2   VSWRLISLWENNNVIFKILN------TEHEMYLKLDVNVDRY 109
           ++WR+   W   NV+ KI+       T    Y+ + +++DRY
Sbjct: 104 IAWRITVAWYAGNVLCKIIRFLQAVVTYSSTYVLVALSIDRY 145


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 323 HNPAVAVKPFYI*PCYNKLYH 385
           HNPA +  P Y  P YN  Y+
Sbjct: 23  HNPAYSPPPSYCDPWYNPYYY 43


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.37
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 288 GTVADN-PEYYGFIIQPWQ*NPSTSDHVIINFITA 389
           G  A+N P Y+G    PWQ      +  ++N++ A
Sbjct: 212 GIAAENSPLYWGGADTPWQREYENVNSTVVNWVNA 246


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 22  SLGKQQRHLQDTEHRTRDVLETGRERGQIWRQED 123
           SL +   H+Q T+H T  +    +E+   WR  D
Sbjct: 490 SLAEMTSHMQQTQHYTNII---SQEQIISWRSSD 520


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 345 NPSTSDHVIINFITAKKKK 401
           NPS   H+I  F T K  K
Sbjct: 547 NPSLCTHIIYAFATLKDHK 565


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  SLGKQQRHLQDTEHRTRDVLETGRERG 102
           SLG  +R   + + +T D+ E  +E+G
Sbjct: 509 SLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  SLGKQQRHLQDTEHRTRDVLETGRERG 102
           SLG  +R   + + +T D+ E  +E+G
Sbjct: 509 SLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  SLGKQQRHLQDTEHRTRDVLETGRERG 102
           SLG  +R   + + +T D+ E  +E+G
Sbjct: 509 SLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 22  SLGKQQRHLQDTEHRTRDVLETGRERG 102
           SLG  +R   + + +T D+ E  +E+G
Sbjct: 509 SLGMNRRRDDEADVKTEDLDEIQKEKG 535


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 278 PHKAVPYRPRSRPASGPA 225
           PH   PY PR  P   P+
Sbjct: 23  PHSPEPYPPRCPPIYEPS 40


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 258 VRDRLVWGNNGTVADNPEY 314
           +RD+L+  N+ ++ D P Y
Sbjct: 190 LRDQLLMPNDVSITDEPAY 208


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 245 RPASGPAGTPYSQ*GTAVGRPPSPGINTRCVS 150
           RP    + T Y     A   PPSP  + +C+S
Sbjct: 77  RPMHQNSYTGYHLGSYAANCPPSPKDDEKCLS 108


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 64  RTRDVLETGRERGQIWRQEDLGIE 135
           R +D+LE  R+RG +    ++GI+
Sbjct: 446 RWKDILEKPRQRGTL-EGNNMGIQ 468


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = -1

Query: 254 PRSRPASGPAGTPYSQ*GTAVGRPPSPG 171
           P   P+ GP   PY+        P S G
Sbjct: 115 PPLTPSPGPPSHPYTVISNGYSSPMSSG 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,985
Number of Sequences: 336
Number of extensions: 2323
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)