Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00042
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 308 DFVRNVLVNNSHNSIMKSLRIKL 376
           DF   + VNNS N+ M + RI L
Sbjct: 481 DFTYKITVNNSGNNRMGTCRIFL 503


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 174 VRIFKETIVCLLCFFFC 224
           VR  K TI+ +L FF C
Sbjct: 271 VRTLKMTIIIVLVFFVC 287


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 174 VRIFKETIVCLLCFFFC 224
           VR  K TI+ +L FF C
Sbjct: 271 VRTLKMTIIIVLVFFVC 287


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 175 FEYLKKP-LSVYCVFFFVKI*FWRFCLQNIVIF 270
           FE   +P L  Y +F FV + FW   L +   F
Sbjct: 85  FECDNEPKLRHYLIFIFVNVFFWVIILMSNYAF 117


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 458 QLLRNVHIISCISLYGILGRYWQ 390
           +LLR  H I  +S   +   YWQ
Sbjct: 380 ELLRRFHEIRYMSTIDLRSSYWQ 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,232
Number of Sequences: 336
Number of extensions: 3581
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)