Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00038
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 150 DVEKILSSVGIEADGEKLKKVITELNGKDVEQL 248
           DVE++LS   + A GE+   + +    ++V+QL
Sbjct: 329 DVEEMLSHQSMPATGERQTLMFSATFPEEVQQL 361


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 151 SAAAGVVLPPSTASKYA 101
           +AAA  +LPP TA+  A
Sbjct: 131 AAAAAALLPPQTAAMAA 147


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 231 KDVEQLIAPDVRSC 272
           +D+E  + P VR+C
Sbjct: 240 EDIEMFVMPTVRNC 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,101
Number of Sequences: 336
Number of extensions: 1487
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)