Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C02
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    73   3e-15
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.10 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.10 
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    26   0.31 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.0  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 72.5 bits (170), Expect = 3e-15
 Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
 Frame = +1

Query: 124 RTYQYRKVMXPMLERXRRARINRCLDELXELMVSALQSEGXNVXKLEKADILELTV---X 294
           R    R+   P++E+ RRARIN  L+EL  L++ A++ +     KLEKADILE+TV    
Sbjct: 30  RVSDNRRSNKPIMEKRRRARINNSLNELKTLILDAMKKDPARHSKLEKADILEMTVKHLQ 89

Query: 295 XXXXXXXXXXXXXNPTVDVDRFRAGFTHAAXEVSRCLASIPGVDVRLGTQLMTHLGHRLN 474
                        +P+V V +FRAGF+  A EV R     PG+D  +  +L+ HL   LN
Sbjct: 90  NLQRQQAAMSAATDPSV-VSKFRAGFSECASEVGR----FPGLDPVVKRRLLQHLASCLN 144

Query: 475 EMQR 486
           + Q+
Sbjct: 145 QGQK 148


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 388 EVSRCLASIPGVDVRLGTQLMTHLGHRL 471
           EV R   S+  +  +LG  L+TH GH+L
Sbjct: 370 EVLRLYPSVHFISRKLGEDLVTHSGHKL 397


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 388 EVSRCLASIPGVDVRLGTQLMTHLGHRL 471
           EV R   S+  +  +LG  L+TH GH+L
Sbjct: 370 EVLRLYPSVHFISRKLGEDLVTHSGHKL 397


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 388 EVSRCLASIPGVDVRLGTQLMTHLGHRL 471
           EV R   S+P +   LG  ++T+ GH+L
Sbjct: 53  EVLRLYPSVPFIARSLGEDIVTYSGHKL 80


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 466 CARGGSLVECPTSRPHQEL 410
           C   G++++C  SRP +++
Sbjct: 248 CGTDGTMIKCLKSRPARQI 266


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 466 CARGGSLVECPTSRPHQEL 410
           C   G++++C  SRP +++
Sbjct: 248 CGTDGTMIKCLKSRPARQI 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,234
Number of Sequences: 336
Number of extensions: 2352
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)