Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_D14
         (864 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.33 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +3

Query: 417 FSIPIIFLL---YTCLYLLFNNKHYFALWGSLEKSQISSNLL*SCVIFTSIGCCYGCSVV 587
           F++ ++FLL   Y  L+LLF    Y+     +     + +LL  CV+   +   Y     
Sbjct: 189 FNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFII---FTIHLLFYCVLIILLCIYYFYYAF 245

Query: 588 CVFGLHSSYTVANLEFFFVYLYDCC 662
            +F +H    V    F++++L  CC
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCC 270



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 414 AFSIPIIFLLYTCLYLLFNNKHYFAL 491
           AF I  + LL+ C ++ FN    F L
Sbjct: 172 AFIIFTMHLLFCCAFIFFNMHLLFLL 197


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +2

Query: 725 YISREEYICLQLKCTFYLNK*LLMPTYVYYVS 820
           +++   +I  Q+  +FYL+K   + T  Y++S
Sbjct: 293 FLNNFYFIIFQVFESFYLHKATTLETVYYFIS 324


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 668 LFTTIVQINKKKLQISNSIAAMK 600
           L T + Q+N + L +SN+I  MK
Sbjct: 505 LETLVHQLNTEVLHLSNAINKMK 527


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 310 LASISWLIYRVASFVENNKDSPSTEH 387
           +  I  L+Y  AS  E   D+PS  H
Sbjct: 300 VVEIYLLVYACASTCEQANDTPSILH 325


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 310 LASISWLIYRVASFVENNKDSPSTEH 387
           +  I  L+Y  AS  E   D+PS  H
Sbjct: 300 VVEIYLLVYACASTCEQANDTPSILH 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,541
Number of Sequences: 336
Number of extensions: 3812
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)