Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_C16
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    27   0.26 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    27   0.26 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 454 GTDPEDVIKNAFGCFDEENNGVIGEERLRELLTTMGDRF 570
           G DPE ++ N  G F + N G +    L     T G R+
Sbjct: 306 GQDPESLLINGKGQFRDPNTGFMTNTPLEVFTITPGRRY 344


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 454 GTDPEDVIKNAFGCFDEENNGVIGEERLRELLTTMGDRF 570
           G DPE ++ N  G F + N G +    L     T G R+
Sbjct: 306 GQDPESLLINGKGQFRDPNTGFMTNTPLEVFTITPGRRY 344


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 660 VFKNTREFHIIEESIADWCFPEH-FIHIIV 574
           VFKN  E  +   S+A W   +H +++I++
Sbjct: 117 VFKNIEEVDVAFRSLAVWVPYKHLYVNILI 146


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 660 VFKNTREFHIIEESIADWCFPEH-FIHIIV 574
           VFKN  E  +   S+A W   +H +++I++
Sbjct: 117 VFKNIEEVDVAFRSLAVWVPYKHLYVNILI 146


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 806 CMQSVLXAYDIIFXQTNITGIYF 874
           C+      YD  F   N+T +YF
Sbjct: 247 CITQFYYCYDSGFNSDNLTDVYF 269


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 621 SIADWCFPEHFIHIIVCEAIAHCGKQL 541
           ++  W     F +I++C+++AH   +L
Sbjct: 237 TVISWQAVCTFYNILLCDSVAHTAGEL 263


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 621 SIADWCFPEHFIHIIVCEAIAHCGKQL 541
           ++  W     F +I++C+++AH   +L
Sbjct: 237 TVISWQAVCTFYNILLCDSVAHTAGEL 263


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 621 SIADWCFPEHFIHIIVCEAIAHCGKQL 541
           ++  W     F +I++C+++AH   +L
Sbjct: 557 TVISWQAVCTFYNILLCDSVAHTAGEL 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,219
Number of Sequences: 336
Number of extensions: 4236
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)