Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C11
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 540  VCYVSNMLWKRKREG 584
            VCY +N  W R+ +G
Sbjct: 2324 VCYFTNWAWYRQGDG 2338



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 540  VCYVSNMLWKRKREG 584
            VCY +N  W RK  G
Sbjct: 1401 VCYFTNWAWYRKGLG 1415


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 464 YRRLLTMSLNILTILIQQMTSIR 532
           Y  LLT + ++L ILIQ   S+R
Sbjct: 287 YIVLLTFASDLLFILIQLFNSLR 309


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 574 NEKVRALASTVLAELCQNNP 633
           NEKV+A    VL  L  N P
Sbjct: 74  NEKVKANVRKVLHHLIDNKP 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,044
Number of Sequences: 336
Number of extensions: 3002
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)