Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_B24
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    23   2.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 445 RVETLESSSSITSDCIQVQSEKPAAAST 528
           RV   ESSS +TS    V S   + AST
Sbjct: 8   RVAPEESSSEVTSSSALVMSPANSLAST 35


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +1

Query: 310 MDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLR 420
           +DS+ +    P+   + K+  L  E   +K+ ++DL+
Sbjct: 273 LDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLK 309


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 110 ELYLNTIKKLVHTIKLNFYVNKVNRANLTAVQ 15
           E+Y   I +LV T+K     + V    L  +Q
Sbjct: 359 EVYNKEISRLVETLKFQSITSAVVTYELIVIQ 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,759
Number of Sequences: 336
Number of extensions: 2296
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)