Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A17
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.39 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.90 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.3  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 301 SKRVNLFHRWRVVTGHSVPLWAENL 227
           + ++N FH W +   HS P  AE+L
Sbjct: 236 ASKLNSFH-WHITDSHSFPFTAESL 259


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 289 NLFHRWRVVTGHSVPLWAENLHLE 218
           +L   W  VTG + PL+A ++ +E
Sbjct: 212 DLHGSWESVTGQNAPLYASSIDVE 235


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -2

Query: 283 FH-RWRVVTGHSVPLWA 236
           FH +W   TGH+ PL++
Sbjct: 281 FHGKWERETGHNAPLYS 297


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 283 FHRWRVVTGHSVP 245
           +H WRVV  + +P
Sbjct: 499 YHNWRVVYNNKIP 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,594
Number of Sequences: 336
Number of extensions: 4284
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)