Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0016
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 180  DSYYNGCCNGTFWPLFHSM 236
            D + N CC G+F PL  S+
Sbjct: 970  DDFSNRCCGGSF-PLLRSL 987


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 375 HTIGGLPFLSFFCLFSRWRAWTVFSANSSF 286
           +TIG +  +   C++S +  W  F + S+F
Sbjct: 44  YTIGVIITIGCLCIWSIFNKWNQFRSYSNF 73


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +2

Query: 356 GSPPIVWVHDYHLM--LAANWIRQRAEEDEIKCKLAFFLH 469
           G     W  +Y  +     NW+   A+  ++   LAF+ H
Sbjct: 223 GGADTPWQREYENVNSTVVNWVNAGADPGKLTIGLAFYGH 262


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 171 KLFDSYYNGCCNGTFWP 221
           K FD+ Y  C   + WP
Sbjct: 22  KDFDTLYRDCTTASSWP 38


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 526 AKLHQTREQSKNIPRWKRYVQKEC*LAFNLIF 431
           +KLH+   + K++  WK Y + +  +   L F
Sbjct: 109 SKLHKLDNKLKHMLIWKSYKRTQIFITCELFF 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,530
Number of Sequences: 336
Number of extensions: 4452
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)