Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0080
(573 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.8
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 1.8
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.9
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 9.9
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 21 9.9
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 9.9
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 248 NFQGPQRVSGHRRKC 204
NF GP R++ R+C
Sbjct: 601 NFHGPHRLAARSRRC 615
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 120 PDLSAASSGHFGLPRRTLVFKDEG 49
P +S++ G VFKDEG
Sbjct: 2 PHVSSSGGDDLGSTDEVKVFKDEG 25
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 248 NFQGPQRVSGHRRKC 204
NF GP R++ R+C
Sbjct: 493 NFHGPHRLAARSRRC 507
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 444 HRPHPLPVQTXHAPVLRANPYS 379
+R HPL + + H +L NP S
Sbjct: 332 NRCHPLSLSSDHQAMLHHNPMS 353
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 166 RIPWNSNAQAEKKTLPGPLG 107
+IPW+ NA+A K G G
Sbjct: 330 QIPWDKNAEALAKWANGQTG 349
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +1
Query: 442 VPGLVDVRALCSF*QLVF*YNAVKTVYI*YDTREIVL 552
VPG++ + ++ S L+ Y+ + + + TRE+ +
Sbjct: 1030 VPGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVAV 1066
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +1
Query: 442 VPGLVDVRALCSF*QLVF*YNAVKTVYI*YDTREIVL 552
VPG++ + ++ S L+ Y+ + + + TRE+ +
Sbjct: 1030 VPGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVAV 1066
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +1
Query: 442 VPGLVDVRALCSF*QLVF*YNAVKTVYI*YDTREIVL 552
VPG++ + ++ S L+ Y+ + + + TRE+ +
Sbjct: 1030 VPGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVAV 1066
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +1
Query: 442 VPGLVDVRALCSF*QLVF*YNAVKTVYI*YDTREIVL 552
VPG++ + ++ S L+ Y+ + + + TRE+ +
Sbjct: 1030 VPGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVAV 1066
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 261 TSPPEFSRSAESIRTPPQMRCSSR 190
+SP S + R P RC+SR
Sbjct: 64 SSPRSISEDPLNCRDLPNSRCNSR 87
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 422 SKPDTPRSSEP 390
SKP TP S EP
Sbjct: 227 SKPGTPPSGEP 237
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 20.6 bits (41), Expect = 9.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 6 FLFRNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRG 116
F+ P+ F + P L + G + S TPP G
Sbjct: 60 FINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 20.6 bits (41), Expect = 9.9
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +3
Query: 6 FLFRNPAAEPFQ*SFPRL*KRVFDGVTQSGLKTPPRG 116
F+ P+ F + P L + G + S TPP G
Sbjct: 60 FINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,088
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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