Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0062
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.086
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   7.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.086
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 396 LCLQFFCNFFIIIRPHWVIFIGHIPIKIT 310
           LC+ +FC  FII   H+       P+K T
Sbjct: 296 LCIYYFCRAFIIFPTHFYCAFSLYPLKST 324


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 298  SLNVRDFDWNVANEYDPMWPNDY 366
            SL +RD   N A EY     NDY
Sbjct: 1360 SLFIRDVSRNNAGEYSCHVENDY 1382


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 410 MTEETGWIGNERAGLVMMKT*FQRK 484
           M E+T WIG +    V +KT + ++
Sbjct: 317 MYEDTFWIGYDNEQSVTIKTEYAKE 341


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 601 IGGGDEDSVVREGGGAIATPVALF 530
           +G  + +SV+  GGG + +  A+F
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIF 24


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 601 IGGGDEDSVVREGGGAIATPVALF 530
           +G  + +SV+  GGG + +  A+F
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIF 24


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 601 IGGGDEDSVVREGGGAIATPVALF 530
           +G  + +SV+  GGG + +  A+F
Sbjct: 1   MGSNNVNSVIVVGGGLVGSLCAIF 24


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 314 ILIGMWPMNMTQCGLMIMKKLQKNC 388
           +L+G++P  +   G     K  KNC
Sbjct: 18  LLLGLYPSYLQTVGKCQRLKTDKNC 42


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 700 LNPYLAIIFAATELAP*PPME 638
           L P LA+IF   ELA   P E
Sbjct: 85  LFPLLALIFEKCELATCTPRE 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,822
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)