Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0053
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   5.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.5  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 527 LIVS*CYILLCDSGFIVYGYSQQRDV 450
           +IV   Y+L     F+VYG S+ R++
Sbjct: 248 IIVVITYVLNLTDLFLVYGMSKSRNI 273


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 49  CLLWHFFSIFLGNVRMFLITFL 114
           C+L H F+I + NV +  + F+
Sbjct: 70  CILKHIFNILMKNVTLNDVVFI 91


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 559 RRCCYATKCCQRLLLNSQK 615
           R C YATK C  L ++ ++
Sbjct: 290 RDCSYATKYCHSLKIHLRR 308


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 559 RRCCYATKCCQRLLLNSQK 615
           R C YATK C  L ++ ++
Sbjct: 48  RDCSYATKYCHSLKIHLRR 66


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 513 MLHLAVRQWFYSVRILATARCLY*LIN 433
           M H  V+++ +SVRI+     ++ L+N
Sbjct: 1   MQHEVVKKFLHSVRIVFVQSEIFCLVN 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,242
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)