Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0055
         (465 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    20   9.8  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 100 CVTSYNWLFGFPIVFENCF 44
           CV  +N +FG+ I+F + F
Sbjct: 147 CVIYFNRIFGWNILFGHIF 165


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 85  NWLFGFPIV 59
           N LFGFPI+
Sbjct: 250 NMLFGFPII 258


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 103 QCVTSYNWLFGFPIV 59
           +CV  +N LFGF ++
Sbjct: 203 ECVDLFNSLFGFLVL 217


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 103 QCVTSYNWLFGFPIVF 56
           + V  +N +FG+P+VF
Sbjct: 227 EMVGLFNDIFGWPLVF 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,615
Number of Sequences: 336
Number of extensions: 1622
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)