Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20101
         (590 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    26   0.27 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    26   0.27 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333 KTLELKYYFNFWAY 292
           KT +L Y+F FWA+
Sbjct: 319 KTTQLDYFFTFWAF 332


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333 KTLELKYYFNFWAY 292
           KT +L Y+F FWA+
Sbjct: 319 KTTQLDYFFTFWAF 332


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -1

Query: 362 HYFSVISCPEKH*N*NITLIFGLIIRACFYNITYLYYLYLQSNA--ISKFLTT*LFYIYI 189
           HY S     +K       +IF  ++  CF  + Y+Y    ++N+  +  F      YI+ 
Sbjct: 133 HYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSSKCENNSTGVEHFFKKQFHYIFT 192

Query: 188 H 186
           +
Sbjct: 193 Y 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,527
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)