Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20098
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.6  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 71  EVTQILYSNIQKLLPTQESRDLAE 142
           EV Q+    +QK L T+E +DL +
Sbjct: 19  EVAQVWEQTLQKGLDTEEIKDLLQ 42


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 5/15 (33%), Positives = 9/15 (60%)
 Frame = -3

Query: 543 WEGEVATVEREECCP 499
           WEG +  +  ++C P
Sbjct: 98  WEGALCNINTDDCSP 112


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 143 LRPDLCFLALATVSGYCCT 87
           L P+L +L +A  SGY  T
Sbjct: 116 LAPNLTYLLVALYSGYVWT 134


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 65  ILEVTQILYSNIQKLLPTQE 124
           + +V ++LY++I  +LP  E
Sbjct: 353 VFDVLKLLYNDIVNMLPKGE 372


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +2

Query: 11  PILSNLKEKWNDLVVPEKILEV 76
           P+L++    W+ L  P++ +E+
Sbjct: 422 PLLTSALASWSPLTNPKQYMEI 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,085
Number of Sequences: 336
Number of extensions: 2246
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)