Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20074
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.53 
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   1.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   3.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.8  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.0  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +2

Query: 89  DIDFPSPKGADSELQDFLIQEKQKAQFQAQIHE 187
           DID+  PKG++ +    L+ ++ +  F+A+  E
Sbjct: 207 DIDWEYPKGSEDKKNYVLLLKELREAFEAEAQE 239


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WWN L+ K   +  YKN+
Sbjct: 98  WWNELEAKYDPTGIYKNK 115



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 82 FCILLSIVFLNLKYSTKLHKV 20
          F  +LS+VF   KY+TK   +
Sbjct: 9  FVAVLSVVFAADKYTTKYDNI 29


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 83  FLYSAEYCIFKSKIFHQ 33
           F+   EY  F+SK+FH+
Sbjct: 148 FIRKEEYISFESKVFHK 164


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WWN L+ K   +  YKN+
Sbjct: 98  WWNELEAKYDPTGIYKNK 115


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WWN L+ K     EY+ +
Sbjct: 100 WWNELEEKYDKEGEYRKK 117


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 125 ELQDFLIQEKQKAQFQAQIHEF 190
           E+ DF    K+ +QFQ   HEF
Sbjct: 276 EVADFQETLKKISQFQLDAHEF 297


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 125 ELQDFLIQEKQKAQFQAQIHEF 190
           E+ DF    K+ +QFQ   HEF
Sbjct: 276 EVADFQETLKKISQFQLDAHEF 297


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WW  L+ K     EYK +
Sbjct: 97  WWQELEAKFDPKGEYKQK 114


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 89  DIDFPSPKGADSELQDFLIQEKQKA 163
           DID+  P  AD E    L+QE ++A
Sbjct: 142 DIDWEYPANADKENFVKLLQEMKQA 166


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WW  L+ K     EYK +
Sbjct: 97  WWQELESKFDPQGEYKKK 114


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 34  WWNILDLKIQYSAEYKNE 87
           WW  L+ K     EYK +
Sbjct: 97  WWQELESKFDPQGEYKKK 114


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 282 ESFHTVCDTFSVRES--SLAPGFSIHLSQQKLLNSCICAWN 166
           E+    CD +   ++  +  P   +HL+++++L    C W+
Sbjct: 516 ETGEAACDPYRPWQTVYNHRPWQQLHLNKKQILGGEACLWS 556


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 544 YKQQLHAQIQISKSK 500
           Y+Q++HAQ+ +  +K
Sbjct: 90  YRQEVHAQVYVCLAK 104


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 189 LIVSVGTSVLKNLELSWTLGPKMYHKLC 272
           LI++VG   LKN E +     K+   LC
Sbjct: 9   LILTVGGRNLKNAEFNGLPEEKLLDALC 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,238
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)