Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20064
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   2.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   6.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.6  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 KYYLNIKRVAIKSYRERV 261
           KYYL  K+++ K++RE V
Sbjct: 372 KYYLGEKKLSKKTFRELV 389


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 KYYLNIKRVAIKSYRERV 261
           KYYL  K+++ K++RE V
Sbjct: 372 KYYLGEKKLSKKTFRELV 389


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 KYYLNIKRVAIKSYRERV 261
           KYYL  K+++ K++RE V
Sbjct: 372 KYYLGEKKLSKKTFRELV 389


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 586 SNCPRGLEYLSMIDQLIMHQKVE 654
           ++CP  L+YL M D+ + H ++E
Sbjct: 165 ASCPMNLQYLPM-DRQLCHIEIE 186


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 KYYLNIKRVAIKSYRERV 261
           KYYL  K+++ +++RE V
Sbjct: 372 KYYLGEKKLSKRTFRELV 389


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 659 NNSTF*CIISWSIMERYSK 603
           NN+T+ C+  W ++   SK
Sbjct: 157 NNTTWRCLYRWIVLYTLSK 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,304
Number of Sequences: 336
Number of extensions: 3951
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)