Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20046
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 329 TWYTADWGRSRQTAQHKMP 273
           TW T  WG  R T  H  P
Sbjct: 32  TWSTYRWGNGRFTVDHIDP 50


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 151 LTWRFTFWSFSH 116
           L + FTFW+FS+
Sbjct: 323 LDYFFTFWAFSN 334


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 413  CLYLFVAALCQY 448
            C+YLF+   C Y
Sbjct: 1131 CVYLFLCGFCVY 1142


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 151 LTWRFTFWSFSH 116
           L + FTFW+FS+
Sbjct: 323 LDYFFTFWAFSN 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,272
Number of Sequences: 336
Number of extensions: 3346
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)