Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20039
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    28   0.072
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.9 bits (59), Expect = 0.072
 Identities = 15/72 (20%), Positives = 31/72 (43%)
 Frame = +3

Query: 114 LHGFGREATNDKRISRMFHLTGGRTSCESARVGTTALPISAVKQ*CVRFEGWGSRCNYTE 293
           + G+ +   + ++I+    + G   +  SA       P+        ++ G      Y E
Sbjct: 243 IRGWIQRGADPQKIALGLPVYGKTFTLSSASNAKLGAPVKGAGN-SGKYTGEAGMLGYNE 301

Query: 294 ILELISQGGWRI 329
           I+EL  +GGW++
Sbjct: 302 IVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 255 RFEGWGSRCNYTEILELISQGGW 323
           R+ G      Y EI+E  + GGW
Sbjct: 293 RYTGERGMMGYNEIVEAQNAGGW 315


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 133 RQRTTNAFRECFTS----LAVGPLVSPRE*VPPPCLFLP*SS 246
           R+R+T A R    +    +A+G    P +  PPP  F P +S
Sbjct: 176 RRRSTAASRSRLAAFKRTIALGAFYQPLQPFPPPYPFYPGTS 217


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 377 LPGVKWLLEPMDIHNVNAPPTLRYK 303
           +PG  WL  P  + N   P +LR+K
Sbjct: 4   VPG--WLTPPHSLGNTVTPVSLRFK 26


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 473 RFLFIMNTHGTVVYEK*LITVAW 541
           RFL ++    TV+ E  L T+ W
Sbjct: 267 RFLIMLALSYTVIQEVMLFTILW 289


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 371 GVKWLLEPMDIHNVNAPPT 315
           G  W L+    H+V AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 385 ARPST*AIKKKLFFVLLNLECSSVKSIYFAVPIYNEYARHRGI 513
           +RP T A    L  V   +  S++  IY+  PIY + +  + I
Sbjct: 22  SRPKTRAKIYALCVVTALVTPSALSIIYYRQPIYAKISETKSI 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,771
Number of Sequences: 336
Number of extensions: 3559
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)