Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30074X
         (372 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   7.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    20   9.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 198 FVTLLIFIYIIYYRGVCIESASECV 124
           ++ LLIF Y+I   G  I +  +C+
Sbjct: 121 WIWLLIFAYLIPEVGTWIRAVRKCL 145


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 198 FVTLLIFIYIIYYRGVCIESASECV 124
           ++ LLIF Y+I   G  I +  +C+
Sbjct: 121 WIWLLIFAYLIPEVGTWIRAVRKCL 145


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 201 YFVTLLIFIYIIYY 160
           YFV  L F+  IYY
Sbjct: 135 YFVVPLFFLLCIYY 148


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -1

Query: 264 FFFVSQTKIYTL*GSNVFTKGYFVTLLIFIYIIYYRGVCIES 139
           FF  S   I    G  + ++     +L+FI+I+   GV  ++
Sbjct: 137 FFLRSLFAIMLPLGILLISQDVIANVLLFIFIVVKSGVAFQT 178


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 169 NINKYQQRYKIPFRKNIRSLKCI 237
           NIN     +KIPF   +R +  +
Sbjct: 357 NINFVSTFFKIPFYSTLRPINLL 379


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 223 SLKCIYFCLAYKKKELHI*YFTDFRSSSTANV*KVTFST 339
           S+  I+F  A KK E  I  F  +    T  +    FST
Sbjct: 66  SIVTIFFNFATKKLEQFIVRFMKYHFFGTLKLWSQLFST 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,645
Number of Sequences: 336
Number of extensions: 1853
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)