Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30063
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   3.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.9  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.1  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 358 GGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVKP 465
           GG   G    T +E T   L   K +   RVK+ KP
Sbjct: 137 GGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKP 172



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 559 RMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDR 666
           R+KA    N+   +  NGR  I +V S+  D  F R
Sbjct: 410 RLKASNEINEALLKRLNGRGVIHLVPSKIRDVYFLR 445


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = -1

Query: 564 HPLDSFRLLTHKDEDLMVYVQNEAVPVVQGLKCRFYLLNADVSFTLDLEESFLCSLIDRH 385
           +PL++F+L T   + L V+        V+    R Y +    SF +    +++C+L++ +
Sbjct: 5   NPLEAFKLNTFFLKALTVWH-------VENPTYRLYKIFVVFSFAVTFFSAWICALVNYN 57

Query: 384 VAE 376
           V+E
Sbjct: 58  VSE 60


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 193 ARNGCPMLDGP 161
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 193 ARNGCPMLDGP 161
           ARNG P +DGP
Sbjct: 460 ARNGSPNVDGP 470


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 193 ARNGCPMLDGP 161
           ARNG P +DGP
Sbjct: 462 ARNGSPNVDGP 472


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,923
Number of Sequences: 336
Number of extensions: 3917
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)