Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30060
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   3.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   4.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   8.6  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 363 HDRSRRDVHLLTRHRCHNIRR 301
           H R  RD HL T  R H   R
Sbjct: 16  HKRFTRDHHLKTHMRLHTGER 36


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 328 CQKVHITPRTVVSGM 372
           CQK  ITP T  +G+
Sbjct: 34  CQKAPITPDTEATGL 48


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 363 HDRSRRDVHLLTRHRCHNIRR 301
           H R  RD HL T  R H   R
Sbjct: 169 HKRFTRDHHLKTHMRLHTGER 189


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 90  PYGRHRSLTLDSVHLFCNRLL 28
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 90  PYGRHRSLTLDSVHLFCNRLL 28
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 315 HNIRRHRYGSHAYFGSRHIV 256
           HNI  + Y SH+ + S +++
Sbjct: 340 HNIAHNPYPSHSIYPSSNLM 359


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 223 KTDRTGKDFKTDNM 264
           K++R GKD   D+M
Sbjct: 188 KSERNGKDLDDDDM 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,507
Number of Sequences: 336
Number of extensions: 1305
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)