Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30045
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 645 LFCLVSRVSLHFLTSHLKRRSKI 577
           LFC++  V LHFLT +L    K+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKL 195


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 645 LFCLVSRVSLHFLTSHLKRRSKI 577
           LFC++  V LHFLT +L    K+
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKL 195


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 200 NDVMDYNIVSQGKTVIP 250
           N +  ++IV  GKTVIP
Sbjct: 423 NCIAKFDIVPNGKTVIP 439


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 121 SLLGDDTSLLKQIGFDVSTSQFSGWT 44
           ++LG  T  L  +G  V+  Q   WT
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDNWT 945


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 121 SLLGDDTSLLKQIGFDVSTSQFSGWT 44
           ++LG  T  L  +G  V+  Q   WT
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDNWT 945


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 121 SLLGDDTSLLKQIGFDVSTSQFSGWT 44
           ++LG  T  L  +G  V+  Q   WT
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDNWT 945


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 121 SLLGDDTSLLKQIGFDVSTSQFSGWT 44
           ++LG  T  L  +G  V+  Q   WT
Sbjct: 920 TILGPGTIFLMLVGAFVAAFQIDNWT 945


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 306 VSPKRRKTMYTR 341
           + PKR++T YTR
Sbjct: 231 MEPKRQRTAYTR 242


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 306 VSPKRRKTMYTR 341
           + PKR++T YTR
Sbjct: 231 MEPKRQRTAYTR 242


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -1

Query: 648 CLFCLVSRVSLHFLTSHLKRRSKIPLQRAPTELMTW 541
           C++C  S  SL  +TSH+++        +  ++++W
Sbjct: 481 CMWCGQSFRSLAEMTSHMQQTQHYTNIISQEQIISW 516


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 306 VSPKRRKTMYTR 341
           + PKR++T YTR
Sbjct: 231 MEPKRQRTAYTR 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,892
Number of Sequences: 336
Number of extensions: 2858
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)