Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30043X
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   2.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   2.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   4.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   5.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 251  WIHPGIPVHLPADVD 207
            W   G+  +LP+D+D
Sbjct: 1834 WYRQGVGKYLPSDID 1848



 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 251  WIHPGIPVHLPADVD 207
            W   G+  +LP D+D
Sbjct: 1409 WYRKGLGKYLPEDID 1423


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 307 TIKIKIIAPSERKDSVWIGGSILASLS 227
           +I+I  I P ER  + W+   + A ++
Sbjct: 144 SIQIYSIKPKERNSNHWVRSGLFALIT 170


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 307 TIKIKIIAPSERKDSVWIGGSILASLS 227
           +I+I  I P ER  + W+   + A ++
Sbjct: 100 SIQIYSIKPKERNSNHWVRSGLFALIT 126


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 209 PHLLEGGQGCQDG 247
           PH L G +GC+ G
Sbjct: 131 PHNLVGREGCKKG 143


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 251 WIHPGIPV 228
           WIHP IP+
Sbjct: 544 WIHPWIPL 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,536
Number of Sequences: 336
Number of extensions: 1303
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)