Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0053
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 377 SIGRGSGRCCQSRLSGDGEXNCDGG 303
           S+  G G C +  L  +GE +C  G
Sbjct: 121 SLACGDGNCIERGLFCNGEKDCSDG 145


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 466 KHR*TGREQKASPEVVPSRNVAKVSAVNGNADYNRGERS 582
           K R   R +K  PE+  S  VAK+ A      ++  ER+
Sbjct: 160 KARMIDRVKKEKPEMSDSEIVAKLVAYTSAQSHSSVERA 198


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +3

Query: 381 LPIPVLPRTPHKXXTRPSCTRPRGGTK 461
           +P P +  TP     RP  T    G+K
Sbjct: 399 VPEPTISTTPRPEWARPPSTPSADGSK 425


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 109  PRLCSPDVAYHPKVTFLTVKIRVK 180
            P+ C+P + Y+P+      K +VK
Sbjct: 1231 PQNCAPGLHYNPEEHMCDWKYKVK 1254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,629
Number of Sequences: 336
Number of extensions: 2761
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)