Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0011
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.79 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   5.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.4  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.8  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 706 PSMCRLIHLFYTRLSFIKNHIR 641
           P++CR+    Y R S +K H+R
Sbjct: 249 PNVCRICGKSYARPSTLKTHLR 270


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 129 YNQTRIFVVCQLF 91
           Y +T+IF+ C+LF
Sbjct: 127 YKRTQIFITCELF 139


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 249 SKYKNPCILQNV-GTIRNDNADIHFQVQADYFIFQPYI 359
           +K+  P  L+ + G+++N N D  F +    FIFQ  I
Sbjct: 206 AKHMWPADLEAIYGSLKNLNTDHGFLLGQKPFIFQEVI 243


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 512 KYLLALFNTKSDPLVSRL 459
           KY++ ++ T SDP V  L
Sbjct: 440 KYIIQIWTTGSDPQVRNL 457


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 365 CTYVWLKYEVIRLNLEMY 312
           C  VWL  EV+ + L +Y
Sbjct: 291 CPIVWLMDEVVEIYLLVY 308


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 365 CTYVWLKYEVIRLNLEMY 312
           C  VWL  EV+ + L +Y
Sbjct: 291 CPIVWLMDEVVEIYLLVY 308


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 569 DERSLKLENYEIDDDIEVSQ 628
           D   +  + YEIDDD + S+
Sbjct: 119 DPDGIYRKQYEIDDDYDYSE 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,496
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)