Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0064
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.3  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   9.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -2

Query: 119 RSSLNLAVSQIIWRRIVMMFNES--FVFQSI 33
           R++  L  SQI W RI  M   S  F+F SI
Sbjct: 265 RTAAELQASQIKWTRIAYMALASVPFIFDSI 295


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -2

Query: 119 RSSLNLAVSQIIWRRIVMMFNES--FVFQSI 33
           R++  L  SQI W RI  M   S  F+F SI
Sbjct: 283 RTAAELQASQIKWTRIAYMALASVPFIFDSI 313


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 625 TYNRFEFNPYKNIIHFLYTLTQTAKA*VFHS*KLLSR 735
           TY RF+    +   HF + LT+  +  + H+  L  R
Sbjct: 12  TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 48


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 595 FLDKKINVFLKYILVDITFSIR 530
           F D+K+N      L+D  F+IR
Sbjct: 440 FFDEKLNALCMTWLMDHVFAIR 461


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 625 TYNRFEFNPYKNIIHFLYTLTQTAKA*VFHS*KLLSR 735
           TY RF+    +   HF + LT+  +  + H+  L  R
Sbjct: 163 TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 199


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 625 TYNRFEFNPYKNIIHFLYTLTQTAKA*VFHS*KLLSR 735
           TY RF+    +   HF + LT+  +  + H+  L  R
Sbjct: 222 TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,704
Number of Sequences: 336
Number of extensions: 4381
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)