Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0126
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.063
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   5.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.063
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = -3

Query: 614 IVILSNFNEIFLN*YFRWTVHRHFVLQFVTYCVHILASTCISIHLSIFCSEQVRYYF*FL 435
           + I  N + +FL     +TVH  F   F+ + VH L  T    +  I       +Y+ F+
Sbjct: 62  VSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121

Query: 434 YICVH 420
              VH
Sbjct: 122 IFTVH 126



 Score = 27.5 bits (58), Expect = 0.11
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
 Frame = -3

Query: 548 HFVLQFVTYCVHILASTCISIHLSIFCSEQVRYYF*FLYICVHPRSYPYQSGYSFSKTFI 369
           +F   F+ + VH+L   CI   +         YYF   +I            Y F   FI
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI 174

Query: 368 EF-LHLSDKTKPS*YQVTVHFYYFHSLYHVVLSYYVLHSYF 249
            F +HL        +     F+  H L+ + L Y+ LH  F
Sbjct: 175 IFTMHLL-------FCCAFIFFNMHLLFLLCLDYFTLHLLF 208



 Score = 26.6 bits (56), Expect = 0.19
 Identities = 17/67 (25%), Positives = 25/67 (37%)
 Frame = -3

Query: 572 YFRWTVHRHFVLQFVTYCVHILASTCISIHLSIFCSEQVRYYF*FLYICVHPRSYPYQSG 393
           Y+ + +H  F   F+ + +H+L   CI             YYF   +I      Y   S 
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSL 318

Query: 392 YSFSKTF 372
           Y    TF
Sbjct: 319 YPLKSTF 325



 Score = 25.8 bits (54), Expect = 0.33
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
 Frame = -3

Query: 665 IMTLFCPHNLFIRGVLNIVILSNFNEIFLN*YFRWTVHRHFVLQFVTYCVHILASTCI-- 492
           I   +C   +F   +L ++ + +F   F+     +T+H  F   F+ + +H+L   C+  
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFII----FTMHLLFCCAFIFFNMHLLFLLCLDY 201

Query: 491 -SIHLSIFCSEQVRYYF*FLYICVHPRSYPYQ----SGYSFSKTFIEF-LHLSDKTKPS* 330
            ++HL +F      +Y  F+   +H   Y         Y F   FI F +HL        
Sbjct: 202 FTLHL-LFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLV---- 256

Query: 329 YQVTVHFYYFHSLYHVVLSYYVLHSYF 249
                +FYY H L+      + +H  F
Sbjct: 257 --CIYYFYYMHLLFCCAFIIFTMHLLF 281


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 690 VHLHLSVAHHDP 655
           VHLH+   HH+P
Sbjct: 86  VHLHIYDMHHNP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,837
Number of Sequences: 336
Number of extensions: 3387
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)