Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0050
(636 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 22 3.7
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 22 3.7
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 4.9
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 4.9
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 6.5
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 6.5
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 6.5
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 6.5
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 8.6
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 8.6
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 8.6
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 22.2 bits (45), Expect = 3.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 479 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 360
+ G LSI + ++FS + VL +++ R TPS N
Sbjct: 49 NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 22.2 bits (45), Expect = 3.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 479 SSGDLLSIFT-ACSLIFSMASLDAVLTALIRTRG*TPSSTN 360
+ G LSI + ++FS + VL +++ R TPS N
Sbjct: 49 NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRIN 89
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.8 bits (44), Expect = 4.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +3
Query: 156 PWDGQADCRSQWKGG 200
PWD A+ ++W G
Sbjct: 332 PWDKNAEALAKWANG 346
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 135 GQNHPGSPWDGQADCRSQW 191
GQN P SP + R +W
Sbjct: 417 GQNQPESPESSSSTPRHEW 435
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 228 HDRCSIV*YNRLSIVIYNQLVHPTGTQGGSDRIDDKL 118
HD C++ Y S V +LV GSD + K+
Sbjct: 149 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 185
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 228 HDRCSIV*YNRLSIVIYNQLVHPTGTQGGSDRIDDKL 118
HD C++ Y S V +LV GSD + K+
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 228 HDRCSIV*YNRLSIVIYNQLVHPTGTQGGSDRIDDKL 118
HD C++ Y S V +LV GSD + K+
Sbjct: 150 HDSCTVNNYQDASNVRNCELVGLADLNQGSDYVRSKI 186
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 209 TMEQRS*SYWISFTLPLKLLWILQSLKMPRLA 304
T+ + + +F + LKL+WI+ K L+
Sbjct: 430 TIHSKLCKLYATFLIALKLVWIVALFKNENLS 461
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 114 LSTCRRCGQNHP 149
L TC RC N+P
Sbjct: 512 LQTCVRCPNNYP 523
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/14 (42%), Positives = 7/14 (50%)
Frame = -3
Query: 106 CWRRAGACPASGPF 65
CW+ CP G F
Sbjct: 583 CWQNEENCPIGGKF 596
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.0 bits (42), Expect = 8.6
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 471 RLIINFHSLLLDFLNGQS*RCSDCSDQNTRVNTFFNKRLQPLQNFTGQYHYRG 313
R+ HS ++ NGQ+ ++ + N + L P +N+ G +H G
Sbjct: 314 RIYDAIHSGVVRGDNGQNIPLTEFEGIDVLGNIIESSILSPNRNYYGDFHNMG 366
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,089
Number of Sequences: 336
Number of extensions: 3182
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -