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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0034
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 238 ELVKSSEEYLDRRRTRSLNAPS 303
           EL+ +S + LD+ R  SL  PS
Sbjct: 40  ELISNSSDALDKIRYESLTNPS 61


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 473 YTGSFMTKAWWWFV 514
           +T S+MT  W W +
Sbjct: 124 HTSSYMTGIWVWLI 137


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 473 YTGSFMTKAWWWFV 514
           +T S+MT  W W +
Sbjct: 357 HTSSYMTGIWVWLI 370


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 473 YTGSFMTKAWWWFV 514
           +T S+MT  W W +
Sbjct: 357 HTSSYMTGIWVWLI 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,041
Number of Sequences: 336
Number of extensions: 3772
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).