Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0002
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 135 DWCSDTRERTARWYRKVEEQIV 200
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 135 DWCSDTRERTARWYRKVEEQIV 200
           D C+   ++T  W  K++EQ V
Sbjct: 299 DACTIASKQTISWCYKLQEQFV 320


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 88  VDWNYPDQFSKQQALRTGALIPENALPVG 174
           +DW YP+   K+  +     I E   P G
Sbjct: 143 IDWEYPEAKDKENFITLLREIKEAFQPKG 171


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 410 YGYDNVTKWCGP 445
           YG D   +WC P
Sbjct: 578 YGLDQQNQWCKP 589


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 410 YGYDNVTKWCGP 445
           YG D   +WC P
Sbjct: 470 YGLDQQNQWCKP 481


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 319 NSLPSKLG*GVNFGDGSYGASRECSS 242
           N+ PS      NF + S GAS   SS
Sbjct: 129 NNTPSATNNNTNFNNNSNGASSVGSS 154


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 319 NSLPSKLG*GVNFGDGSYGASRECSS 242
           N+ PS      NF + S GAS   SS
Sbjct: 77  NNTPSATNNNTNFNNNSNGASSVGSS 102


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 319 NSLPSKLG*GVNFGDGSYGASRECSS 242
           N+ PS      NF + S GAS   SS
Sbjct: 260 NNTPSATNNNTNFNNNSNGASSVGSS 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,903
Number of Sequences: 336
Number of extensions: 3624
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)