Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0069
(403 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 4.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 4.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 4.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 4.5
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 4.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 4.5
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 6.0
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 20 7.9
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 20 7.9
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 20 7.9
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 113 RQQQNNETKY--DK-NSYTRKLATRTLNITRAPXRFD 214
R+ +N K DK NSY +LAT + R+ R D
Sbjct: 30 REMRNRAEKMRRDKLNSYIGELATLVPMVARSAKRMD 66
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 173 NGETKRQRTSYTR 185
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 5 NGETKRQRTSYTR 17
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 125 NNETKYDKNSYTR 163
N ETK + SYTR
Sbjct: 217 NGETKRQRTSYTR 229
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 20.6 bits (41), Expect = 6.0
Identities = 12/51 (23%), Positives = 20/51 (39%)
Frame = -2
Query: 249 MFYCYFKIFIIXSNLXGARVMFSVRVASFRVYEFLSYLVSLFCC*RCINRY 97
+ YC IF++ L + V S ++ S V+ INR+
Sbjct: 413 LVYCSLAIFVLCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVINRW 463
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 20.2 bits (40), Expect = 7.9
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 72 APSSSSILNND*YNVNNR 125
+PSS++++ N+ N N+R
Sbjct: 333 SPSSTNLIQNEASNENSR 350
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 20.2 bits (40), Expect = 7.9
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 72 APSSSSILNND*YNVNNR 125
+PSS++++ N+ N N+R
Sbjct: 122 SPSSTNLIQNEASNENSR 139
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 20.2 bits (40), Expect = 7.9
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 72 APSSSSILNND*YNVNNR 125
+PSS++++ N+ N N+R
Sbjct: 122 SPSSTNLIQNEASNENSR 139
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,213
Number of Sequences: 336
Number of extensions: 925
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8646818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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