Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0050
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 485 RVHAVISMLGRSIDGQSPHVVKSRIKWQTGAHPQK-HVCAEVITRCPEVIF 336
           RV  VIS L  S    +P  +  RIK  +G   ++    AEV+T  P+++F
Sbjct: 193 RVEEVISDLALSKCQNTPIGILGRIKGISGGEKKRLSFAAEVLTN-PKLMF 242


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 485 RVHAVISMLGRSIDGQSPHVVKSRIKWQTGAHPQK-HVCAEVITRCPEVIF 336
           RV  VIS L  S    +P  +  RIK  +G   ++    AEV+T  P+++F
Sbjct: 193 RVEEVISDLALSKCQNTPIGILGRIKGISGGEKKRLSFAAEVLTN-PKLMF 242


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = -1

Query: 464  MLGRSIDGQSPHVVKSRIKWQTGAHPQKHVCAEVITRCPEVIFV 333
            +LGR  D   P     +     G  PQ+ V    +  C   +FV
Sbjct: 2200 ILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVPCQGRLFV 2243


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 387 WMSTGLPFNATFNYMRRLPIDAPAQH 464
           W+ TGL  +A   +  R  I  PA H
Sbjct: 110 WLGTGLLTSAGPKWQNRRKILTPAFH 135


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 8   CCVSALLRVTTLIRTLPADPKLIRQYAVLLDIM 106
           CC  + LR  T+  T   DP  +R  A  ++ M
Sbjct: 83  CCRESFLRERTITLTHCYDPDGVRLTAETVNSM 115


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 387 WMSTGLPFNATFNYMRRLPIDAPAQH 464
           W+ TGL  +    +  R  I  PA H
Sbjct: 117 WLGTGLLTSTGLKWQTRRKILTPAFH 142


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 394 APVCHLMRLLTTCGDCPS 447
           A V H++ ++ TC   PS
Sbjct: 323 AAVEHILSIVNTCSQIPS 340


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 387 WMSTGLPFNATFNYMRRLPIDAPAQH 464
           W+ TGL  +    +  R  I  PA H
Sbjct: 117 WLGTGLLTSTGLKWQTRRKILTPAFH 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,646
Number of Sequences: 336
Number of extensions: 2493
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)