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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0067
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.71 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.71 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.71 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.71 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.71 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.71 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.71 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.71 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
           YNP A+S  PP+ +S   V PQ     +  P P  G    +G
Sbjct: 30  YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 464 IRWYINGHEMEDTRG 508
           I W +NGH ++ T G
Sbjct: 636 ISWTLNGHFIDQTNG 650



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 166 TGRRAEYTIVSNTRSGTDPTGSLW 237
           T RR +  ++     G  P G LW
Sbjct: 807 TSRRGDPAVLQCEAKGEKPIGILW 830


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -2

Query: 511 FAPCVFHFMSVYV 473
           F PC+++F S ++
Sbjct: 208 FLPCIYYFYSAFI 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,710
Number of Sequences: 336
Number of extensions: 3316
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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