Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0051
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.9  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   3.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 163 PITFIRSV*KIKSNSNEVLILWTMIIAIILKDVFFRVNKMLIL 291
           PI FI+ + KIK N  +      M ++ + K + F V+ + IL
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVS-VWKCLLFFVSVLFIL 318


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 163 PITFIRSV*KIKSNSNEVLILWTMIIAIILKDVFFRVNKMLIL 291
           PI FI+ + KIK N  +      M ++ + K + F V+ + IL
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVS-VWKCLLFFVSVLFIL 318


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 163 PITFIRSV*KIKSNSNEVLILWTMIIAIILKDVFFRVNKMLIL 291
           PI FI+ + KIK N  +      M ++ + K + F V+ + IL
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVS-VWKCLLFFVSVLFIL 318


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 163 PITFIRSV*KIKSNSNEVLILWTMIIAIILKDVFFRVNKMLIL 291
           PI FI+ + KIK N  +      M ++ + K + F V+ + IL
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVS-VWKCLLFFVSVLFIL 318


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 413 AHVVKYAFCIXE 378
           AH++ YAFC+ +
Sbjct: 275 AHMINYAFCVQQ 286


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 413 AHVVKYAFCIXE 378
           AH++ YAFC+ +
Sbjct: 275 AHMINYAFCVQQ 286


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 82  ECYCCETMFI 53
           ECYCC   F+
Sbjct: 80  ECYCCRESFL 89


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 290 NINILLTRKNTSFRIIAIIMVHRISTSFEFDLIF 189
           NIN+LLT +  + R  A  M   + +  E ++IF
Sbjct: 175 NINLLLTEQLQNRRFFAKKMEGLVCSIKELNMIF 208


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 140 LIVLYSICPSRSYEVCKKLNQIQTRC*FYG 229
           LIV Y++     ++  +K  +I+T C + G
Sbjct: 178 LIVNYALALKNRFKELQKYLKIETSCRYVG 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,735
Number of Sequences: 336
Number of extensions: 2252
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)