Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0295
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 371 SLRNDLLIEPKH 336
           S  ND +I+PKH
Sbjct: 582 SFENDFIIQPKH 593


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 110 KGKFTNEQSLKKKRIFLNASHLHYVTCSPGDPRVL 6
           +GK   ++S+ KK    +    HYV    G+ R L
Sbjct: 549 RGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWL 583


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 110 KGKFTNEQSLKKKRIFLNASHLHYVTCSPGDPRVL 6
           +GK   ++S+ KK    +    HYV    G+ R L
Sbjct: 782 RGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWL 816


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 110 KGKFTNEQSLKKKRIFLNASHLHYVTCSPGDPRVL 6
           +GK   ++S+ KK    +    HYV    G+ R L
Sbjct: 782 RGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDRWL 816


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 416 YVLFHNRLHNISLSTV 463
           Y L H  L N+SLS V
Sbjct: 445 YTLLHLNLDNVSLSQV 460


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -2

Query: 110 KGKFTNEQSLKKKRIFLNASHLHYVTCSPGDPR 12
           +GK   ++S+ KK    +    HYV    G+ R
Sbjct: 235 RGKALMDKSVMKKYTTRSTQAKHYVQYDQGEDR 267


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 363 KRFIN*TKTLNSFSIS*PXMFNSS 292
           KRF+  T  + + ++  P  FNSS
Sbjct: 164 KRFVVMTSVIMTLALGNPYCFNSS 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,071
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)